Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | SAMN04488094_10819 | Not Available | Positive | 2816843 - 2818585 | 63447.0 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04488094_10820 | Not Available | Positive | 2818582 - 2820579 | 72341.9 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04488094_10821 | Not Available | Positive | 2820583 - 2821758 | 40923.5 |
| acyl carrier protein | SAMN04488094_10822 | Not Available | Positive | 2821755 - 2822033 | 10039.7 |
| Trna-glu | Not Available | Not Available | Positive | 2822187 - 2822261 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04488094_10824 | Not Available | Negative | 2823088 - 2824140 | 38414.3 |
| haem-no-binding | SAMN04488094_10825 | Not Available | Negative | 2824137 - 2824736 | 21830.2 |
| phosphoglycolate phosphatase | SAMN04488094_10826 | Not Available | Negative | 2824818 - 2825513 | 23767.5 |
| protein of unknown function | SAMN04488094_10827 | Not Available | Negative | 2825556 - 2825834 | 9699.45 |
| response regulator receiver modulated diguanylate cyclase | SAMN04488094_10828 | Not Available | Positive | 2825937 - 2827406 | 52842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
