Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_107199 | Not Available | Positive | 2794098 - 2794736 | 23719.1 |
| hypothetical protein | SAMN04488094_107200 | Not Available | Positive | 2795011 - 2795226 | 7877.28 |
| homodimeric dihydroxyacetone kinase | SAMN04488094_1081 | Not Available | Positive | 2795392 - 2797158 | 60585.0 |
| lactate dehydrogenase | SAMN04488094_1082 | Not Available | Negative | 2797320 - 2798255 | 32358.3 |
| n-alpha-acetyl-l-2,4-diaminobutyrate deacetylase | SAMN04488094_1083 | Not Available | Negative | 2798367 - 2799383 | 35971.1 |
| ectoine hydrolase | SAMN04488094_1084 | Not Available | Negative | 2799380 - 2800576 | 45175.7 |
| alanine or glycine:cation symporter, agcs family | SAMN04488094_1085 | Not Available | Positive | 2801143 - 2802597 | 50837.6 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN04488094_1086 | Not Available | Positive | 2803014 - 2803511 | 18637.1 |
| trap transporter, dctm subunit | SAMN04488094_1087 | Not Available | Positive | 2803508 - 2804833 | 47357.7 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN04488094_1088 | Not Available | Positive | 2804919 - 2806007 | 39765.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
