Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN04488094_107179 | Not Available | Positive | 2775238 - 2776185 | 33923.8 |
| peptide/nickel transport system permease protein | SAMN04488094_107180 | Not Available | Positive | 2776182 - 2778116 | 68272.0 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_107181 | Not Available | Positive | 2778113 - 2779084 | 34892.2 |
| transcriptional regulator, gntr family | SAMN04488094_107182 | Not Available | Positive | 2779041 - 2779832 | 29344.7 |
| hydrolase, peptidase m42 family | SAMN04488094_107183 | Not Available | Negative | 2779881 - 2781059 | 42352.2 |
| cation:h+ antiporter | SAMN04488094_107184 | Not Available | Positive | 2781207 - 2782235 | 35675.8 |
| hypothetical protein | SAMN04488094_107185 | Not Available | Positive | 2782533 - 2782694 | 5912.96 |
| f-type h+-transporting atpase subunit gamma | SAMN04488094_107186 | Not Available | Negative | 2782736 - 2783608 | 30831.2 |
| f-type h+-transporting atpase subunit alpha | SAMN04488094_107187 | Not Available | Negative | 2783605 - 2785137 | 53764.4 |
| atp synthase f0 subcomplex b subunit | SAMN04488094_107188 | Not Available | Negative | 2785130 - 2785864 | 26926.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
