Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar assembly protein flih | SAMN04488094_107159 | Not Available | Positive | 2752980 - 2753582 | 21833.0 |
| flagellar motor switch protein flin/fliy | SAMN04488094_107160 | Not Available | Positive | 2753575 - 2753859 | 10273.3 |
| flagellar biosynthetic protein flip | SAMN04488094_107161 | Not Available | Positive | 2753856 - 2754608 | 27002.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_107162 | Not Available | Negative | 2754662 - 2755591 | 33766.2 |
| d-fructose 1,6-bisphosphatase | SAMN04488094_107163 | Not Available | Positive | 2755691 - 2756698 | 36379.9 |
| phosphoribulokinase | SAMN04488094_107164 | Not Available | Positive | 2756712 - 2757599 | 33437.6 |
| transketolase | SAMN04488094_107165 | Not Available | Positive | 2757596 - 2759602 | 70888.9 |
| fructose-bisphosphate aldolase | SAMN04488094_107166 | Not Available | Positive | 2759625 - 2760704 | 38612.1 |
| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | SAMN04488094_107167 | Not Available | Positive | 2760723 - 2762192 | 54327.1 |
| ribulose-bisphosphate carboxylase small chain | SAMN04488094_107168 | Not Available | Positive | 2762204 - 2762593 | 15030.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
