Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system atp-binding protein | SAMN04488094_107119 | Not Available | Negative | 2706561 - 2707241 | 24386.7 |
| capsular polysaccharide transport system permease protein | SAMN04488094_107120 | Not Available | Negative | 2707252 - 2708787 | 56504.6 |
| capsular polysaccharide transport system permease protein | SAMN04488094_107121 | Not Available | Positive | 2708912 - 2709739 | 30904.6 |
| udp-galactopyranose mutase | SAMN04488094_107122 | Not Available | Positive | 2709790 - 2710944 | 43995.0 |
| glycosyltransferase, gt2 family | SAMN04488094_107123 | Not Available | Negative | 2711014 - 2712090 | 40260.3 |
| polysaccharide export outer membrane protein | SAMN04488094_107124 | Not Available | Negative | 2712300 - 2713400 | 39207.7 |
| serralysin | SAMN04488094_107125 | Not Available | Negative | 2713556 - 2715103 | 54370.4 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488094_107126 | Not Available | Negative | 2715243 - 2715974 | 28196.2 |
| udp-glucose dehydrogenase | SAMN04488094_107127 | Not Available | Negative | 2715964 - 2717268 | 46688.9 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN04488094_107128 | Not Available | Positive | 2717429 - 2718097 | 23641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
