Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/carnithine racemase | SAMN04488094_10799 | Not Available | Negative | 2686230 - 2686847 | 21782.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488094_107100 | Not Available | Negative | 2686844 - 2687599 | 26405.6 |
| hypothetical protein | SAMN04488094_107101 | Not Available | Positive | 2687829 - 2689331 | 52316.1 |
| 2-octaprenylphenol hydroxylase | SAMN04488094_107102 | Not Available | Negative | 2689462 - 2691141 | 62653.0 |
| do/deqq family serine protease | SAMN04488094_107103 | Not Available | Negative | 2691254 - 2692654 | 48415.7 |
| pmba protein | SAMN04488094_107104 | Not Available | Positive | 2692806 - 2694152 | 46944.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04488094_107105 | Not Available | Positive | 2694139 - 2694918 | 28035.3 |
| protein of unknown function | SAMN04488094_107106 | Not Available | Positive | 2695149 - 2695391 | 9164.68 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04488094_107107 | Not Available | Positive | 2695402 - 2696664 | 44808.0 |
| lipid-a-disaccharide kinase | SAMN04488094_107108 | Not Available | Positive | 2696664 - 2697653 | 34729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
