Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488094_10789 | Not Available | Negative | 2675657 - 2677141 | 54603.7 |
| outer membrane protein ompu | SAMN04488094_10790 | Not Available | Negative | 2677245 - 2678483 | 43960.6 |
| protein of unknown function | SAMN04488094_10791 | Not Available | Positive | 2678724 - 2679215 | 17739.9 |
| leucyl-trna synthetase | SAMN04488094_10792 | Not Available | Positive | 2679303 - 2681876 | 95300.7 |
| lps-assembly lipoprotein | SAMN04488094_10793 | Not Available | Positive | 2681863 - 2682360 | 17726.9 |
| dna polymerase iii, delta subunit | SAMN04488094_10794 | Not Available | Positive | 2682357 - 2683388 | 36499.0 |
| glutathione s-transferase | SAMN04488094_10795 | Not Available | Positive | 2683494 - 2684081 | 21892.5 |
| hypothetical protein | SAMN04488094_10796 | Not Available | Negative | 2684118 - 2685296 | 41039.0 |
| hypothetical protein | SAMN04488094_10797 | Not Available | Positive | 2685397 - 2685711 | 11866.3 |
| large conductance mechanosensitive channel | SAMN04488094_10798 | Not Available | Positive | 2685810 - 2686205 | 14198.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
