Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10779 | Not Available | Negative | 2668604 - 2668801 | 7234.79 |
| hypothetical protein | SAMN04488094_10780 | Not Available | Negative | 2668798 - 2669439 | 23929.8 |
| putative thioredoxin | SAMN04488094_10781 | Not Available | Negative | 2669466 - 2670389 | 32091.9 |
| exodeoxyribonuclease-3 | SAMN04488094_10782 | Not Available | Negative | 2670456 - 2671244 | 29704.3 |
| hypothetical protein | SAMN04488094_10783 | Not Available | Positive | 2671383 - 2671877 | 17194.9 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488094_10784 | Not Available | Negative | 2671925 - 2672386 | 17527.2 |
| two component transcriptional regulator, winged helix family | SAMN04488094_10785 | Not Available | Negative | 2672532 - 2673218 | 25718.1 |
| gtp cyclohydrolase ii | SAMN04488094_10786 | Not Available | Positive | 2673383 - 2674465 | 38213.8 |
| l,d-transpeptidase catalytic domain | SAMN04488094_10787 | Not Available | Positive | 2674462 - 2674956 | 18581.3 |
| hypothetical protein | SAMN04488094_10788 | Not Available | Negative | 2675014 - 2675667 | 23334.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
