Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN04488094_10769 | Not Available | Positive | 2657638 - 2659077 | 50848.3 |
| ribosomal large subunit pseudouridine synthase a | SAMN04488094_10770 | Not Available | Negative | 2659104 - 2659757 | 24088.2 |
| anti-sigma b factor antagonist | SAMN04488094_10771 | Not Available | Positive | 2659855 - 2660199 | 12556.3 |
| histidine kinase-like atpase domain-containing protein | SAMN04488094_10772 | Not Available | Positive | 2660454 - 2660771 | 11473.7 |
| heat shock protein hspq | SAMN04488094_10773 | Not Available | Negative | 2660991 - 2661317 | 12585.5 |
| hypothetical protein | SAMN04488094_10774 | Not Available | Positive | 2661614 - 2662198 | 22143.5 |
| outer membrane lipoprotein-sorting protein | SAMN04488094_10775 | Not Available | Negative | 2662220 - 2662816 | 21467.6 |
| dna translocase ftsk | SAMN04488094_10776 | Not Available | Negative | 2662910 - 2665843 | 104767.0 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488094_10777 | Not Available | Negative | 2665859 - 2667043 | 43178.6 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN04488094_10778 | Not Available | Positive | 2667359 - 2668588 | 44038.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
