Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10749 | Not Available | Positive | 2639192 - 2639545 | 13100.2 |
| lysyl-trna synthetase, class i | SAMN04488094_10750 | Not Available | Negative | 2639641 - 2641224 | 59537.4 |
| tellurite resistance protein terb | SAMN04488094_10751 | Not Available | Positive | 2641366 - 2641788 | 15430.4 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488094_10752 | Not Available | Negative | 2641799 - 2643400 | 57263.7 |
| nicotinate-nucleotide adenylyltransferase | SAMN04488094_10753 | Not Available | Negative | 2643418 - 2644014 | 22598.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488094_10754 | Not Available | Positive | 2644144 - 2645100 | 33268.6 |
| atp-binding cassette protein, chvd family | SAMN04488094_10755 | Not Available | Positive | 2645194 - 2646849 | 61317.7 |
| hypothetical protein | SAMN04488094_10756 | Not Available | Negative | 2647018 - 2647302 | 10157.7 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488094_10757 | Not Available | Negative | 2647302 - 2648357 | 38941.9 |
| putative peptidoglycan binding domain-containing protein | SAMN04488094_10758 | Not Available | Positive | 2648509 - 2650203 | 60805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
