Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN04488094_10729 | Not Available | Positive | 2616414 - 2617754 | 47069.3 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_10730 | Not Available | Positive | 2617924 - 2619537 | 58901.8 |
| peptide/nickel transport system permease protein | SAMN04488094_10731 | Not Available | Positive | 2619534 - 2620571 | 37562.2 |
| peptide/nickel transport system permease protein | SAMN04488094_10732 | Not Available | Positive | 2620568 - 2621413 | 29948.4 |
| dipeptide transport system atp-binding protein | SAMN04488094_10733 | Not Available | Positive | 2621410 - 2622408 | 35293.2 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_10734 | Not Available | Positive | 2622405 - 2623352 | 34456.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488094_10735 | Not Available | Positive | 2623664 - 2624578 | 34604.6 |
| polysaccharide deacetylase | SAMN04488094_10736 | Not Available | Positive | 2624575 - 2625504 | 35286.1 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_10737 | Not Available | Positive | 2625501 - 2626319 | 30175.4 |
| nitt/taut family transport system permease protein | SAMN04488094_10738 | Not Available | Positive | 2626322 - 2627143 | 29973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
