Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN04488094_10154 | Not Available | Negative | 60025 - 60810 | 28765.1 |
| pseudouridine-5'-phosphate glycosidase | SAMN04488094_10155 | Not Available | Negative | 60896 - 61810 | 30916.3 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488094_10156 | Not Available | Negative | 61812 - 62699 | 30581.9 |
| cupin domain-containing protein | SAMN04488094_10157 | Not Available | Negative | 62798 - 63133 | 12154.3 |
| ssu ribosomal protein s2p | SAMN04488094_10158 | Not Available | Positive | 63351 - 64148 | 28920.6 |
| translation elongation factor ts (ef-ts) | SAMN04488094_10159 | Not Available | Positive | 64235 - 65110 | 30429.6 |
| luxr family transcriptional regulator | SAMN04488094_10160 | Not Available | Negative | 65525 - 66358 | 30549.4 |
| hypothetical protein | SAMN04488094_10161 | Not Available | Negative | 66392 - 66565 | 6371.55 |
| methyltransferase domain-containing protein | SAMN04488094_10162 | Not Available | Positive | 66712 - 67467 | 28491.4 |
| glutaredoxin | SAMN04488094_10163 | Not Available | Positive | 67758 - 68534 | 29066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
