Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein gp37 | SAMN04488094_10719 | Not Available | Positive | 2605369 - 2606256 | 33270.7 |
| cystathionine beta-lyase | SAMN04488094_10720 | Not Available | Negative | 2606333 - 2607484 | 41337.5 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04488094_10721 | Not Available | Negative | 2607481 - 2608320 | 30225.6 |
| glycine/d-amino acid oxidase | SAMN04488094_10722 | Not Available | Negative | 2608334 - 2609665 | 48901.2 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_10723 | Not Available | Negative | 2609680 - 2610609 | 34069.0 |
| biotin/methionine sulfoxide reductase | SAMN04488094_10724 | Not Available | Positive | 2610851 - 2613145 | 83180.1 |
| glyoxalase-like domain-containing protein | SAMN04488094_10725 | Not Available | Positive | 2613142 - 2613876 | 25787.5 |
| maleamate amidohydrolase | SAMN04488094_10726 | Not Available | Positive | 2613878 - 2614549 | 24848.2 |
| polysaccharide deacetylase | SAMN04488094_10727 | Not Available | Positive | 2614551 - 2615480 | 35945.4 |
| polysaccharide deacetylase | SAMN04488094_10728 | Not Available | Positive | 2615477 - 2616412 | 34682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
