Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN04488094_1079 | Not Available | Positive | 2592486 - 2594147 | 60858.1 |
| dienelactone hydrolase | SAMN04488094_10710 | Not Available | Positive | 2594254 - 2595126 | 30632.5 |
| hypothetical protein | SAMN04488094_10711 | Not Available | Positive | 2595292 - 2596155 | 29791.4 |
| hypothetical protein | SAMN04488094_10712 | Not Available | Positive | 2596152 - 2596916 | 27078.3 |
| hpt sensor hybrid histidine kinase | SAMN04488094_10713 | Not Available | Negative | 2596945 - 2599278 | 84620.0 |
| hypothetical protein | SAMN04488094_10714 | Not Available | Negative | 2599393 - 2599932 | 19582.5 |
| trimethylamine-n-oxide reductase (cytochrome c) | SAMN04488094_10715 | Not Available | Negative | 2599991 - 2602456 | 89900.5 |
| tora specific chaperone | SAMN04488094_10716 | Not Available | Negative | 2602633 - 2603256 | 22202.6 |
| trimethylamine-n-oxide reductase (cytochrome c), cytochrome c-type subunit torc | SAMN04488094_10717 | Not Available | Negative | 2603268 - 2604437 | 42809.2 |
| two component transcriptional regulator, winged helix family | SAMN04488094_10718 | Not Available | Positive | 2604594 - 2605340 | 28005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
