Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_106194 | Not Available | Positive | 2582328 - 2583509 | 44530.2 |
| transposase, mutator family | SAMN04488094_106195 | Not Available | Negative | 2583542 - 2583836 | 10981.1 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN04488094_1071 | Not Available | Negative | 2583837 - 2584771 | 33969.5 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN04488094_1072 | Not Available | Negative | 2584857 - 2586974 | 78105.4 |
| ssu ribosomal protein s7p | SAMN04488094_1073 | Not Available | Negative | 2587002 - 2587472 | 17931.5 |
| ssu ribosomal protein s12p | SAMN04488094_1074 | Not Available | Negative | 2587485 - 2587856 | 14095.4 |
| s-adenosylmethionine uptake transporter | SAMN04488094_1075 | Not Available | Negative | 2588084 - 2589019 | 32765.8 |
| endonuclease/exonuclease/phosphatase family protein | SAMN04488094_1076 | Not Available | Positive | 2589484 - 2590377 | 32247.3 |
| l-fucose mutarotase | SAMN04488094_1077 | Not Available | Positive | 2590520 - 2590960 | 15679.8 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_1078 | Not Available | Positive | 2591058 - 2592095 | 36262.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
