Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neurotransmitter:na+ symporter, nss family | SAMN04488094_106174 | Not Available | Positive | 2567413 - 2568756 | 46634.3 |
| glutathione s-transferase | SAMN04488094_106175 | Not Available | Negative | 2568859 - 2569479 | 23290.1 |
| dna-binding transcriptional regulator, marr family | SAMN04488094_106176 | Not Available | Negative | 2569473 - 2569961 | 18270.1 |
| peroxiredoxin, ohr subfamily | SAMN04488094_106177 | Not Available | Negative | 2569973 - 2570398 | 14600.3 |
| site-specific recombinase xerd | SAMN04488094_106178 | Not Available | Positive | 2571174 - 2572298 | 41576.2 |
| dna binding domain-containing protein, excisionase family | SAMN04488094_106179 | Not Available | Positive | 2572508 - 2572708 | 7366.66 |
| hypothetical protein | SAMN04488094_106180 | Not Available | Positive | 2572705 - 2573091 | 14927.8 |
| hypothetical protein | SAMN04488094_106181 | Not Available | Positive | 2573276 - 2573515 | 8628.26 |
| hypothetical protein | SAMN04488094_106182 | Not Available | Positive | 2573543 - 2574316 | 27488.2 |
| hypothetical protein | SAMN04488094_106183 | Not Available | Positive | 2574383 - 2575759 | 51371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
