Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen operon protein | SAMN04488094_106134 | Not Available | Positive | 2502310 - 2504343 | 75356.2 |
| malto-oligosyltrehalose trehalohydrolase | SAMN04488094_106135 | Not Available | Positive | 2504336 - 2506075 | 63899.4 |
| (1->4)-alpha-d-glucan 1-alpha-d-glucosylmutase | SAMN04488094_106136 | Not Available | Positive | 2506072 - 2508177 | 77219.2 |
| hypothetical protein | SAMN04488094_106137 | Not Available | Positive | 2508373 - 2509770 | 48945.5 |
| sulfide dehydrogenase (flavoprotein) subunit suda | SAMN04488094_106138 | Not Available | Negative | 2509889 - 2512645 | 100937.0 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN04488094_106139 | Not Available | Negative | 2512642 - 2517633 | 179794.0 |
| multidrug efflux pump | SAMN04488094_106140 | Not Available | Negative | 2518176 - 2521310 | 111738.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488094_106141 | Not Available | Negative | 2521346 - 2522713 | 47301.5 |
| transcriptional regulator, tetr family | SAMN04488094_106142 | Not Available | Positive | 2522875 - 2523570 | 25285.3 |
| ca2+-binding protein, rtx toxin-related | SAMN04488094_106143 | Not Available | Positive | 2523718 - 2528277 | 159860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
