Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04488094_10144 | Not Available | Positive | 50218 - 51108 | 34329.8 |
| pp_00043 | SAMN04488094_10145 | Not Available | Positive | 51146 - 51646 | Not Available |
| hint domain-containing protein | SAMN04488094_10146 | Not Available | Positive | 52373 - 53029 | 23547.2 |
| hypothetical protein | SAMN04488094_10147 | Not Available | Positive | 53381 - 53722 | 11943.5 |
| enoyl-coa hydratase/carnithine racemase | SAMN04488094_10148 | Not Available | Negative | 53745 - 54536 | 28454.3 |
| lsu ribosomal protein l13p | SAMN04488094_10149 | Not Available | Positive | 54800 - 55258 | 17137.8 |
| ssu ribosomal protein s9p | SAMN04488094_10150 | Not Available | Positive | 55264 - 55752 | 17652.3 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_10151 | Not Available | Negative | 55896 - 57707 | 67333.4 |
| 3-hydroxybutyrate dehydrogenase | SAMN04488094_10152 | Not Available | Positive | 58096 - 58869 | 27325.5 |
| nte family protein | SAMN04488094_10153 | Not Available | Positive | 58963 - 60015 | 38563.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
