Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v8-like glu-specific endopeptidase | SAMN04488094_106114 | Not Available | Negative | 2482287 - 2483015 | 24898.2 |
| protein translocase subunit yajc | SAMN04488094_106115 | Not Available | Positive | 2483236 - 2483565 | 11973.7 |
| preprotein translocase subunit secd | SAMN04488094_106116 | Not Available | Positive | 2483593 - 2485254 | 59486.1 |
| protein translocase subunit secf | SAMN04488094_106117 | Not Available | Positive | 2485256 - 2486224 | 35446.2 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN04488094_106118 | Not Available | Positive | 2486259 - 2486612 | 12259.6 |
| heme exporter protein a | SAMN04488094_106119 | Not Available | Positive | 2486756 - 2487376 | 21684.1 |
| heme exporter protein b | SAMN04488094_106120 | Not Available | Positive | 2487373 - 2488038 | 22357.2 |
| heme exporter protein c | SAMN04488094_106121 | Not Available | Positive | 2488096 - 2488824 | 26760.2 |
| heme exporter protein d (ccmd) | SAMN04488094_106122 | Not Available | Positive | 2488821 - 2489033 | 7660.46 |
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | SAMN04488094_106123 | Not Available | Positive | 2489026 - 2489568 | 19002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
