Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN04488094_106104 | Not Available | Positive | 2467959 - 2469776 | 66526.8 |
| hypothetical protein | SAMN04488094_106105 | Not Available | Positive | 2469941 - 2470318 | 13441.1 |
| multidrug efflux pump | SAMN04488094_106106 | Not Available | Negative | 2470401 - 2474159 | 135486.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488094_106107 | Not Available | Negative | 2474185 - 2475447 | 44202.4 |
| hypothetical protein | SAMN04488094_106108 | Not Available | Positive | 2475714 - 2476373 | 22910.2 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04488094_106109 | Not Available | Positive | 2476442 - 2477794 | 46606.4 |
| gtp-binding protein | SAMN04488094_106110 | Not Available | Positive | 2477853 - 2479322 | 54057.2 |
| hypothetical protein | SAMN04488094_106111 | Not Available | Negative | 2479356 - 2480096 | 26089.9 |
| seryl-trna synthetase | SAMN04488094_106112 | Not Available | Negative | 2480093 - 2481385 | 47441.4 |
| hypothetical protein | SAMN04488094_106113 | Not Available | Negative | 2481494 - 2482186 | 25023.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
