Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04488094_10674 | Not Available | Positive | 2436774 - 2437952 | 41895.4 |
| regulator of sigma e protease | SAMN04488094_10675 | Not Available | Positive | 2437959 - 2439293 | 47544.3 |
| hypothetical protein | SAMN04488094_10676 | Not Available | Positive | 2439406 - 2439537 | 4553.51 |
| beta-barrel assembly machine subunit bama | SAMN04488094_10677 | Not Available | Positive | 2439661 - 2442024 | 86956.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488094_10678 | Not Available | Positive | 2442027 - 2442710 | 24680.1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN04488094_10679 | Not Available | Positive | 2442913 - 2443392 | 17385.2 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN04488094_10680 | Not Available | Positive | 2443397 - 2444194 | 27868.4 |
| hypothetical protein | SAMN04488094_10681 | Not Available | Positive | 2444200 - 2445027 | 29043.3 |
| lipid-a-disaccharide synthase | SAMN04488094_10682 | Not Available | Positive | 2445027 - 2446199 | 41857.8 |
| nadh dehydrogenase, fad-containing subunit | SAMN04488094_10683 | Not Available | Negative | 2446248 - 2447330 | 38205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
