Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548 genome assembly,

Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN04488094_10674Not AvailablePositive2436774 - 243795241895.4
regulator of sigma e proteaseSAMN04488094_10675Not AvailablePositive2437959 - 243929347544.3
hypothetical proteinSAMN04488094_10676Not AvailablePositive2439406 - 24395374553.51
beta-barrel assembly machine subunit bamaSAMN04488094_10677Not AvailablePositive2439661 - 244202486956.0
periplasmic chaperone for outer membrane proteins skpSAMN04488094_10678Not AvailablePositive2442027 - 244271024680.1
3-hydroxyacyl-[acyl-carrier-protein] dehydrataseSAMN04488094_10679Not AvailablePositive2442913 - 244339217385.2
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseSAMN04488094_10680Not AvailablePositive2443397 - 244419427868.4
hypothetical proteinSAMN04488094_10681Not AvailablePositive2444200 - 244502729043.3
lipid-a-disaccharide synthaseSAMN04488094_10682Not AvailablePositive2445027 - 244619941857.8
nadh dehydrogenase, fad-containing subunitSAMN04488094_10683Not AvailableNegative2446248 - 244733038205.4

Displaying genes 2441 – 2450 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.