Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2, pa0141 family | SAMN04488094_10664 | Not Available | Positive | 2428381 - 2429334 | 37824.1 |
| phosphinothricin acetyltransferase | SAMN04488094_10665 | Not Available | Positive | 2429500 - 2430045 | 19843.6 |
| single-strand binding protein | SAMN04488094_10666 | Not Available | Negative | 2430124 - 2430621 | 17743.5 |
| transglycosylase slt domain-containing protein | SAMN04488094_10667 | Not Available | Positive | 2430815 - 2431426 | 21678.9 |
| cytochrome c peroxidase | SAMN04488094_10668 | Not Available | Positive | 2431548 - 2432708 | 42464.6 |
| trna dimethylallyltransferase | SAMN04488094_10669 | Not Available | Negative | 2432736 - 2433605 | 31486.6 |
| uridylate kinase | SAMN04488094_10670 | Not Available | Positive | 2433686 - 2434423 | 26703.3 |
| ribosome recycling factor | SAMN04488094_10671 | Not Available | Positive | 2434629 - 2435195 | 21176.5 |
| undecaprenyl diphosphate synthase | SAMN04488094_10672 | Not Available | Positive | 2435244 - 2435966 | 27144.5 |
| phosphatidate cytidylyltransferase | SAMN04488094_10673 | Not Available | Positive | 2436043 - 2436777 | 26111.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
