Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f | SAMN04488094_10654 | Not Available | Positive | 2417557 - 2419380 | 68856.8 |
| hypothetical protein | SAMN04488094_10655 | Not Available | Negative | 2419392 - 2419874 | 16471.7 |
| protein of unknown function | SAMN04488094_10656 | Not Available | Negative | 2420034 - 2420333 | 11245.7 |
| serralysin | SAMN04488094_10657 | Not Available | Negative | 2420423 - 2421691 | 45958.9 |
| predicted dehydrogenase | SAMN04488094_10658 | Not Available | Negative | 2421794 - 2422759 | 34849.3 |
| polyhydroxyalkanoate synthase | SAMN04488094_10659 | Not Available | Positive | 2423103 - 2424941 | 68140.0 |
| protein of unknown function | SAMN04488094_10660 | Not Available | Negative | 2424990 - 2425496 | 18114.1 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN04488094_10661 | Not Available | Negative | 2425697 - 2426593 | 33929.5 |
| ribosomal large subunit pseudouridine synthase d | SAMN04488094_10662 | Not Available | Negative | 2426746 - 2427780 | 36922.3 |
| hypothetical protein | SAMN04488094_10663 | Not Available | Positive | 2427921 - 2428244 | 11599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
