Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme | SAMN04488094_10644 | Not Available | Positive | 2407698 - 2408117 | 15498.7 |
| hypothetical protein | SAMN04488094_10645 | Not Available | Negative | 2408121 - 2408324 | 7415.8 |
| transcriptional repressor nrdr | SAMN04488094_10646 | Not Available | Positive | 2408510 - 2408977 | 17972.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04488094_10647 | Not Available | Positive | 2408985 - 2410118 | 39313.0 |
| capsular polysaccharide export protein | SAMN04488094_10648 | Not Available | Negative | 2410145 - 2412202 | 74349.2 |
| polysaccharide export outer membrane protein | SAMN04488094_10649 | Not Available | Negative | 2412212 - 2413342 | 40601.4 |
| hypothetical protein | SAMN04488094_10650 | Not Available | Negative | 2413515 - 2414234 | 26055.0 |
| riboflavin synthase alpha chain | SAMN04488094_10651 | Not Available | Positive | 2414703 - 2415290 | 20620.4 |
| tade-like protein | SAMN04488094_10652 | Not Available | Positive | 2415560 - 2415958 | 14492.7 |
| hypothetical protein | SAMN04488094_10653 | Not Available | Positive | 2415958 - 2417385 | 50606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
