Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsbb | SAMN04488094_10624 | Not Available | Negative | 2387430 - 2387891 | 16319.3 |
| membrane protein yqaa, snare-associated domain | SAMN04488094_10625 | Not Available | Negative | 2387888 - 2388466 | 21333.9 |
| hypothetical protein | SAMN04488094_10626 | Not Available | Positive | 2388536 - 2389396 | 30885.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488094_10627 | Not Available | Positive | 2389539 - 2390828 | 47287.3 |
| Trna-leu | Not Available | Not Available | Positive | 2390905 - 2390990 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2391228 - 2391302 | Not Available |
| exonuclease recj | SAMN04488094_10630 | Not Available | Negative | 2391407 - 2393149 | 61246.8 |
| fructose-1,6-bisphosphatase ii / sedoheptulose-1,7-bisphosphatase | SAMN04488094_10631 | Not Available | Negative | 2393157 - 2394119 | 34568.9 |
| homoserine dehydrogenase | SAMN04488094_10632 | Not Available | Negative | 2394297 - 2395583 | 44675.0 |
| hypothetical protein | SAMN04488094_10633 | Not Available | Negative | 2395648 - 2395989 | 11765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
