Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN04488094_1064 | Not Available | Positive | 2366567 - 2367421 | 31368.1 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN04488094_1065 | Not Available | Positive | 2367436 - 2368485 | 37911.0 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN04488094_1066 | Not Available | Positive | 2368594 - 2369205 | 22517.6 |
| trap transporter, dctm subunit | SAMN04488094_1067 | Not Available | Positive | 2369207 - 2370535 | 46678.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family (tc 3.a.1.1.-) | SAMN04488094_1068 | Not Available | Positive | 2370933 - 2372279 | 48574.7 |
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN04488094_1069 | Not Available | Positive | 2372353 - 2373600 | 45776.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-) | SAMN04488094_10610 | Not Available | Positive | 2373659 - 2374873 | 43380.3 |
| hypothetical protein | SAMN04488094_10611 | Not Available | Positive | 2374877 - 2376133 | 46821.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_10612 | Not Available | Positive | 2376133 - 2377185 | 37975.8 |
| collagenase-like protease, prtc family | SAMN04488094_10613 | Not Available | Negative | 2377319 - 2378242 | 33885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
