Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subcomplex c subunit | SAMN04488094_105209 | Not Available | Negative | 2325498 - 2325734 | 7556.31 |
| atp synthase f0 subcomplex a subunit | SAMN04488094_105210 | Not Available | Negative | 2325796 - 2326545 | 27099.1 |
| atp synthase protein i | SAMN04488094_105211 | Not Available | Negative | 2326549 - 2326929 | 13211.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_105212 | Not Available | Positive | 2327261 - 2328028 | 26932.8 |
| hypothetical protein | SAMN04488094_105213 | Not Available | Positive | 2328267 - 2328464 | 7157.51 |
| transcriptional regulator, arsr family | SAMN04488094_105214 | Not Available | Positive | 2328548 - 2328889 | 12772.5 |
| eama-like transporter family protein | SAMN04488094_105215 | Not Available | Negative | 2328974 - 2329876 | 31421.3 |
| transcriptional regulator, lysr family | SAMN04488094_105216 | Not Available | Negative | 2329873 - 2330751 | 32715.3 |
| ef hand | SAMN04488094_105217 | Not Available | Positive | 2330957 - 2331835 | 30480.3 |
| fmn-dependent nadh-azoreductase | SAMN04488094_105218 | Not Available | Positive | 2332157 - 2332747 | 20848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
