Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | SAMN04488094_105189 | Not Available | Negative | 2308712 - 2309023 | 11715.8 |
| peptidyl-trna hydrolase | SAMN04488094_105190 | Not Available | Positive | 2309129 - 2309809 | 24640.4 |
| hypothetical protein | SAMN04488094_105191 | Not Available | Positive | 2309896 - 2310279 | 13692.3 |
| small-conductance mechanosensitive channel | SAMN04488094_105192 | Not Available | Positive | 2310372 - 2311256 | 32045.2 |
| tryptophan synthase, beta chain | SAMN04488094_105193 | Not Available | Negative | 2311267 - 2312499 | 44667.6 |
| feruloyl esterase | SAMN04488094_105194 | Not Available | Positive | 2312641 - 2314293 | 58129.8 |
| n-acetylglutamate synthase, gnat family | SAMN04488094_105195 | Not Available | Negative | 2314315 - 2314764 | 16221.3 |
| phosphoribosylanthranilate isomerase | SAMN04488094_105196 | Not Available | Negative | 2314761 - 2315405 | 22376.9 |
| protein of unknown function | SAMN04488094_105197 | Not Available | Negative | 2315412 - 2315780 | 13350.7 |
| integration host factor subunit beta | SAMN04488094_105198 | Not Available | Negative | 2315792 - 2316079 | 10895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
