Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04488094_10124 | Not Available | Positive | 23318 - 24079 | 28415.5 |
| phosphoribosylformylglycinamidine synthase | SAMN04488094_10125 | Not Available | Positive | 24148 - 24387 | 8222.96 |
| phosphoribosylformylglycinamidine synthase subunit i | SAMN04488094_10126 | Not Available | Positive | 24387 - 25055 | 23326.9 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN04488094_10127 | Not Available | Positive | 25187 - 26953 | 64745.7 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488094_10128 | Not Available | Positive | 26995 - 28326 | 48632.8 |
| rnase e | SAMN04488094_10129 | Not Available | Positive | 28786 - 31998 | 115493.0 |
| cytochrome c-type biogenesis protein | SAMN04488094_10130 | Not Available | Positive | 32171 - 32923 | 26476.4 |
| uncharacterized membrane protein | SAMN04488094_10131 | Not Available | Positive | 32970 - 33494 | 19634.9 |
| aconitase | SAMN04488094_10132 | Not Available | Negative | 33546 - 36323 | 100214.0 |
| dna-binding transcriptional regulator, csgd family | SAMN04488094_10133 | Not Available | Positive | 36521 - 37015 | 17985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
