Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine2605 synthase | SAMN04488094_105139 | Not Available | Positive | 2260877 - 2261671 | 29558.9 |
| hypothetical protein | SAMN04488094_105140 | Not Available | Negative | 2261753 - 2262508 | 27081.5 |
| ferredoxin, 2fe-2s | SAMN04488094_105141 | Not Available | Negative | 2262508 - 2262831 | 11656.9 |
| ob-fold nucleic acid binding domain-containing protein | SAMN04488094_105142 | Not Available | Positive | 2262901 - 2263347 | 16149.8 |
| putative peptidoglycan binding domain-containing protein | SAMN04488094_105143 | Not Available | Positive | 2263435 - 2263911 | 16773.9 |
| hypothetical protein | SAMN04488094_105144 | Not Available | Positive | 2264156 - 2264698 | 19013.0 |
| serine protease do | SAMN04488094_105145 | Not Available | Negative | 2264787 - 2266190 | 49390.8 |
| hypothetical protein | SAMN04488094_105146 | Not Available | Negative | 2266669 - 2266863 | 6827.92 |
| protease ftsh subunit hflc | SAMN04488094_105147 | Not Available | Negative | 2266863 - 2268089 | 43357.2 |
| protease ftsh subunit hflk | SAMN04488094_105148 | Not Available | Negative | 2268091 - 2269236 | 41159.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
