Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yebe, duf533 family | SAMN04488094_105128 | Not Available | Negative | 2252443 - 2253159 | 24862.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488094_105130 | Not Available | Negative | 2253650 - 2254288 | 23268.6 |
| hypothetical protein | SAMN04488094_105131 | Not Available | Negative | 2254355 - 2255071 | 24111.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04488094_105132 | Not Available | Negative | 2255106 - 2256596 | 52852.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN04488094_105133 | Not Available | Negative | 2256593 - 2256880 | 10358.4 |
| uncharacterized conserved protein, duf1697 family | SAMN04488094_105134 | Not Available | Negative | 2256979 - 2257491 | 18235.0 |
| h+ antiporter protein | SAMN04488094_105135 | Not Available | Positive | 2257606 - 2258925 | 46715.9 |
| ceramidase | SAMN04488094_105136 | Not Available | Negative | 2258948 - 2259604 | 24164.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488094_105137 | Not Available | Positive | 2259664 - 2260356 | 24756.4 |
| cytidine and deoxycytidylate deaminase zinc-binding region | SAMN04488094_105138 | Not Available | Negative | 2260365 - 2260814 | 15717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
