Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol-1(or 4)-monophosphatase | SAMN04488094_105118 | Not Available | Negative | 2245481 - 2246320 | 29735.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488094_105119 | Not Available | Negative | 2246393 - 2246752 | 13299.9 |
| nadph2:quinone reductase | SAMN04488094_105120 | Not Available | Positive | 2247080 - 2248042 | 34342.4 |
| transcriptional regulator, lysr family | SAMN04488094_105121 | Not Available | Negative | 2247996 - 2248898 | 32913.3 |
| uncharacterized conserved protein yjis, duf1127 family | SAMN04488094_105122 | Not Available | Positive | 2249024 - 2249239 | 8137.75 |
| hypothetical protein | SAMN04488094_105123 | Not Available | Positive | 2249368 - 2250147 | 28014.7 |
| hypothetical protein | SAMN04488094_105124 | Not Available | Negative | 2250275 - 2250646 | 13223.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488094_105125 | Not Available | Positive | 2250723 - 2251472 | 28255.4 |
| acetyltransferase, gnat family | SAMN04488094_105126 | Not Available | Negative | 2251513 - 2252007 | 17578.4 |
| lsu ribosomal protein l33p | SAMN04488094_105127 | Not Available | Negative | 2252093 - 2252260 | 6340.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
