Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | SAMN04488094_10588 | Not Available | Positive | 2211153 - 2213327 | 81311.8 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488094_10589 | Not Available | Positive | 2213380 - 2214936 | 57235.1 |
| hypothetical protein | SAMN04488094_10590 | Not Available | Negative | 2214958 - 2215347 | 14450.2 |
| endonuclease/exonuclease/phosphatase family protein | SAMN04488094_10591 | Not Available | Negative | 2215355 - 2216416 | 39625.6 |
| dnaj like chaperone protein | SAMN04488094_10592 | Not Available | Negative | 2216425 - 2217105 | 24844.6 |
| methylmalonyl-coa mutase | SAMN04488094_10593 | Not Available | Negative | 2217222 - 2219366 | 78282.2 |
| protein of unknown function | SAMN04488094_10594 | Not Available | Positive | 2219803 - 2220294 | 17857.6 |
| hypothetical protein | SAMN04488094_10595 | Not Available | Negative | 2220308 - 2221873 | 55523.1 |
| biotin carboxyl carrier protein/biotin carboxylase | SAMN04488094_10596 | Not Available | Negative | 2221870 - 2223870 | 73503.6 |
| hypothetical protein | SAMN04488094_10597 | Not Available | Negative | 2224006 - 2224224 | 6724.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
