Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system permease protein | SAMN04488094_10578 | Not Available | Negative | 2199434 - 2200330 | 33615.7 |
| putrescine transport system atp-binding protein | SAMN04488094_10579 | Not Available | Negative | 2200335 - 2201483 | 42923.8 |
| putrescine transport system substrate-binding protein | SAMN04488094_10580 | Not Available | Negative | 2201553 - 2202638 | 39723.7 |
| transcriptional regulator, gntr family | SAMN04488094_10581 | Not Available | Positive | 2202781 - 2203473 | 25389.6 |
| glutamine synthetase | SAMN04488094_10582 | Not Available | Positive | 2203608 - 2204978 | 51383.1 |
| putrescine aminotransferase | SAMN04488094_10583 | Not Available | Positive | 2204992 - 2206383 | 49909.9 |
| gamma-glutamylputrescine oxidase | SAMN04488094_10584 | Not Available | Positive | 2206391 - 2207695 | 47562.7 |
| prolyl-trna synthetase | SAMN04488094_10585 | Not Available | Negative | 2207767 - 2209107 | 50617.1 |
| predicted purr-regulated permease perm | SAMN04488094_10586 | Not Available | Positive | 2209276 - 2210400 | 40466.3 |
| dnaa protein | SAMN04488094_10587 | Not Available | Positive | 2210400 - 2211080 | 24463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
