Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase | SAMN04488094_10568 | Not Available | Negative | 2186699 - 2187643 | 35346.7 |
| putative endonuclease | SAMN04488094_10569 | Not Available | Negative | 2187710 - 2188063 | 12950.5 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04488094_10570 | Not Available | Negative | 2188063 - 2188953 | 31692.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family (tc 3.a.1.4.-) | SAMN04488094_10571 | Not Available | Positive | 2189048 - 2190217 | 39592.6 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN04488094_10572 | Not Available | Positive | 2190177 - 2192996 | 106881.0 |
| putative peptidoglycan lipid ii flippase | SAMN04488094_10573 | Not Available | Positive | 2192993 - 2194543 | 54998.5 |
| altronate hydrolase | SAMN04488094_10574 | Not Available | Negative | 2194638 - 2196164 | 54275.4 |
| fructose-1,6-bisphosphatase | SAMN04488094_10575 | Not Available | Negative | 2196334 - 2197173 | 30270.1 |
| glycine/d-amino acid oxidase | SAMN04488094_10576 | Not Available | Negative | 2197285 - 2198625 | 48896.6 |
| putrescine transport system permease protein | SAMN04488094_10577 | Not Available | Negative | 2198622 - 2199437 | 29386.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
