Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10558 | Not Available | Negative | 2177400 - 2177639 | 8472.12 |
| iron-regulated abc transporter membrane component sufb | SAMN04488094_10559 | Not Available | Negative | 2177735 - 2179258 | 56568.6 |
| cysteine desulfurase | SAMN04488094_10560 | Not Available | Negative | 2179286 - 2180338 | 36617.9 |
| haem-binding uptake, tiki superfamily, chan | SAMN04488094_10561 | Not Available | Negative | 2180402 - 2181220 | 29033.0 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN04488094_10562 | Not Available | Negative | 2181217 - 2182095 | 33305.6 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN04488094_10563 | Not Available | Positive | 2182200 - 2182736 | 19386.8 |
| broad specificity phosphatase phoe | SAMN04488094_10564 | Not Available | Positive | 2182730 - 2183302 | 21264.0 |
| glutathione s-transferase | SAMN04488094_10565 | Not Available | Positive | 2183379 - 2184272 | 32931.3 |
| magnesium chelatase family protein | SAMN04488094_10566 | Not Available | Positive | 2184298 - 2185875 | 55020.1 |
| acetyl esterase/lipase | SAMN04488094_10567 | Not Available | Negative | 2185815 - 2186702 | 31436.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
