Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase (or an inactivated derivative) | SAMN04488094_10548 | Not Available | Positive | 2169406 - 2170311 | 33817.5 |
| transposase | SAMN04488094_10549 | Not Available | Positive | 2170559 - 2171179 | 23802.7 |
| Trna-arg | Not Available | Not Available | Positive | 2171289 - 2171365 | Not Available |
| neurotransmitter-gated ion-channel ligand binding domain-containing protein | SAMN04488094_10551 | Not Available | Positive | 2171433 - 2172551 | 41883.5 |
| cysteine desulfurase / selenocysteine lyase | SAMN04488094_10552 | Not Available | Negative | 2172560 - 2173780 | 44194.9 |
| yip1 domain-containing protein | SAMN04488094_10553 | Not Available | Negative | 2173773 - 2174387 | 21607.4 |
| yip1 domain-containing protein | SAMN04488094_10554 | Not Available | Negative | 2174396 - 2174905 | 18230.8 |
| fe-s cluster assembly protein sufd | SAMN04488094_10555 | Not Available | Negative | 2174909 - 2176204 | 46838.0 |
| fe-s cluster assembly atp-binding protein | SAMN04488094_10556 | Not Available | Negative | 2176206 - 2176961 | 27400.1 |
| hypothetical protein | SAMN04488094_10557 | Not Available | Negative | 2177045 - 2177323 | 10073.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
