Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_104220 | Not Available | Positive | 2093135 - 2093578 | 16307.2 |
| hypothetical protein | SAMN04488094_104221 | Not Available | Positive | 2093575 - 2093736 | 5472.82 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488094_104222 | Not Available | Positive | 2093873 - 2094514 | 21846.2 |
| l-lactate dehydrogenase (cytochrome) | SAMN04488094_104223 | Not Available | Negative | 2094593 - 2095729 | 40984.3 |
| d-mannonate dehydratase | SAMN04488094_104224 | Not Available | Negative | 2095774 - 2096979 | 44314.4 |
| transcriptional regulator, gntr family | SAMN04488094_104225 | Not Available | Positive | 2097093 - 2097803 | 26215.6 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_104226 | Not Available | Positive | 2097841 - 2098818 | 35675.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_104227 | Not Available | Positive | 2098888 - 2099394 | 18033.7 |
| trap transporter, dctm subunit | SAMN04488094_104228 | Not Available | Positive | 2099399 - 2100676 | 44563.9 |
| l-idonate 5-dehydrogenase | SAMN04488094_104229 | Not Available | Positive | 2100686 - 2101726 | 36055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
