Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca2+-binding protein, rtx toxin-related | SAMN04488094_104209 | Not Available | Negative | 2082261 - 2084501 | 77302.2 |
| adenine phosphoribosyltransferase | SAMN04488094_104210 | Not Available | Negative | 2084869 - 2085408 | 19194.4 |
| di-and tricarboxylate transporter | SAMN04488094_104211 | Not Available | Positive | 2085661 - 2087439 | 63941.2 |
| protein of unknown function | SAMN04488094_104212 | Not Available | Negative | 2087594 - 2087809 | 8276.01 |
| hypothetical protein | SAMN04488094_104213 | Not Available | Positive | 2087947 - 2088186 | 8581.14 |
| hypothetical protein | SAMN04488094_104214 | Not Available | Positive | 2088206 - 2088583 | 14168.0 |
| nitt/taut family transport system substrate-binding protein | SAMN04488094_104216 | Not Available | Positive | 2088928 - 2089995 | 37090.5 |
| nitt/taut family transport system permease protein | SAMN04488094_104217 | Not Available | Positive | 2090042 - 2090854 | 29372.4 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_104218 | Not Available | Positive | 2091141 - 2091908 | 28538.1 |
| agmatinase | SAMN04488094_104219 | Not Available | Positive | 2091889 - 2093145 | 46304.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
