Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein tadd, contains tpr repeats | SAMN04488094_1015 | Not Available | Positive | 5372 - 7354 | 71854.2 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488094_1016 | Not Available | Negative | 7358 - 8527 | 41872.2 |
| 2,4-diketo-3-deoxy-l-fuconate hydrolase | SAMN04488094_1017 | Not Available | Negative | 8567 - 9415 | 30147.1 |
| hypothetical protein | SAMN04488094_1018 | Not Available | Negative | 9990 - 10388 | 14398.9 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 10496 - 10610 | 18.01 |
| Trna-met | Not Available | Not Available | Positive | 10777 - 10853 | Not Available |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04488094_10110 | Not Available | Positive | 10943 - 12034 | 37306.0 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04488094_10111 | Not Available | Positive | 12031 - 12624 | 21000.4 |
| ribonuclease d | SAMN04488094_10112 | Not Available | Positive | 12719 - 13876 | 42640.9 |
| hypothetical protein | SAMN04488094_10113 | Not Available | Negative | 13908 - 14387 | 17085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
