Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-1 | SAMN04488094_104189 | Not Available | Negative | 2060562 - 2063330 | 101064.0 |
| dna processing protein | SAMN04488094_104190 | Not Available | Negative | 2063455 - 2064636 | 40839.5 |
| tldd protein | SAMN04488094_104191 | Not Available | Negative | 2064797 - 2066230 | 49877.1 |
| cytochrome c oxidase subunit 2 | SAMN04488094_104192 | Not Available | Positive | 2066418 - 2067314 | 32714.4 |
| protoheme ix farnesyltransferase | SAMN04488094_104193 | Not Available | Positive | 2067344 - 2068288 | 34016.2 |
| hypothetical protein | SAMN04488094_104194 | Not Available | Positive | 2068285 - 2068455 | 6133.66 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN04488094_104195 | Not Available | Positive | 2068455 - 2069024 | 21188.2 |
| cytochrome c oxidase subunit 3 | SAMN04488094_104196 | Not Available | Positive | 2069043 - 2069849 | 30867.6 |
| surfeit locus 1 family protein | SAMN04488094_104197 | Not Available | Positive | 2069948 - 2070622 | 24918.0 |
| threonine synthase | SAMN04488094_104198 | Not Available | Positive | 2070748 - 2072136 | 49633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
