Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase cpaa | SAMN04488094_104169 | Not Available | Negative | 2042069 - 2042572 | 17839.5 |
| tpr repeat-containing protein | SAMN04488094_104170 | Not Available | Negative | 2042580 - 2043431 | 31638.2 |
| tpr repeat-containing protein | SAMN04488094_104171 | Not Available | Negative | 2043460 - 2044164 | 25318.2 |
| tight adherence protein c | SAMN04488094_104172 | Not Available | Negative | 2044192 - 2045187 | 36596.8 |
| type ii secretion system protein f (gspf) | SAMN04488094_104173 | Not Available | Negative | 2045197 - 2046165 | 35093.7 |
| pilus assembly protein cpaf | SAMN04488094_104174 | Not Available | Negative | 2046172 - 2047623 | 52899.6 |
| pilus assembly protein cpae | SAMN04488094_104175 | Not Available | Negative | 2047654 - 2049006 | 49278.3 |
| hypothetical protein | SAMN04488094_104176 | Not Available | Negative | 2049212 - 2049526 | 11159.3 |
| pilus assembly protein cpac | SAMN04488094_104177 | Not Available | Negative | 2049532 - 2050935 | 49239.7 |
| pilus assembly protein cpab | SAMN04488094_104178 | Not Available | Negative | 2051140 - 2052024 | 31952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
