Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di-and tricarboxylate transporter | SAMN04488094_104159 | Not Available | Positive | 2027398 - 2028693 | 45890.4 |
| peptidyl-dipeptidase dcp metallo peptidase. merops family m03a | SAMN04488094_104160 | Not Available | Positive | 2029149 - 2031176 | 75268.6 |
| ferrous-iron efflux pump fief | SAMN04488094_104161 | Not Available | Negative | 2031145 - 2032062 | 31781.4 |
| sh3-like domain-containing protein | SAMN04488094_104162 | Not Available | Negative | 2032154 - 2032696 | 19954.0 |
| glyoxylate reductase | SAMN04488094_104163 | Not Available | Positive | 2032800 - 2033786 | 36210.3 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04488094_104164 | Not Available | Negative | 2033934 - 2036342 | 88614.9 |
| hypothetical protein | SAMN04488094_104165 | Not Available | Positive | 2036860 - 2037600 | 25197.4 |
| ompa family protein | SAMN04488094_104166 | Not Available | Negative | 2037945 - 2038907 | 34409.6 |
| hypothetical protein | SAMN04488094_104167 | Not Available | Negative | 2039035 - 2040345 | 49035.5 |
| hypothetical protein | SAMN04488094_104168 | Not Available | Positive | 2040477 - 2042102 | 57781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
