Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_104149 | Not Available | Positive | 2019268 - 2020323 | 36572.3 |
| putative hydrolases of hd superfamily | SAMN04488094_104150 | Not Available | Negative | 2020256 - 2020846 | 21698.9 |
| hypothetical protein | SAMN04488094_104151 | Not Available | Negative | 2020836 - 2021066 | 8600.08 |
| hypothetical protein | SAMN04488094_104152 | Not Available | Negative | 2021076 - 2021729 | 24405.2 |
| transcriptional regulator, badm/rrf2 family | SAMN04488094_104153 | Not Available | Positive | 2021896 - 2022363 | 16574.8 |
| phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylase | SAMN04488094_104154 | Not Available | Positive | 2022542 - 2023738 | 41644.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN04488094_104155 | Not Available | Positive | 2023735 - 2024202 | 16435.6 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN04488094_104156 | Not Available | Positive | 2024202 - 2025242 | 36445.6 |
| gntr family transcriptional regulator | SAMN04488094_104157 | Not Available | Positive | 2025665 - 2026396 | 27381.8 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04488094_104158 | Not Available | Positive | 2026548 - 2027369 | 29871.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
