Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN04488094_104139 | Not Available | Positive | 2010305 - 2011024 | 25686.3 |
| squalene/phytoene synthase | SAMN04488094_104140 | Not Available | Positive | 2011021 - 2011791 | 28100.8 |
| predicted arabinose efflux permease, mfs family | SAMN04488094_104141 | Not Available | Negative | 2011890 - 2013143 | 43296.9 |
| dna-3-methyladenine glycosylase ii | SAMN04488094_104142 | Not Available | Positive | 2013262 - 2013897 | 23399.3 |
| phospholipase/carboxylesterase | SAMN04488094_104143 | Not Available | Positive | 2013974 - 2014645 | 23671.4 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN04488094_104144 | Not Available | Positive | 2014911 - 2015495 | 22487.8 |
| small multidrug resistance pump | SAMN04488094_104145 | Not Available | Negative | 2015506 - 2015841 | 11532.7 |
| uncharacterised 5xtm membrane bcr, yitt family cog1284 | SAMN04488094_104146 | Not Available | Negative | 2015849 - 2016478 | 22560.4 |
| isocitrate dehydrogenase (nadp) | SAMN04488094_104147 | Not Available | Negative | 2016776 - 2017990 | 45585.6 |
| multidrug resistance efflux pump | SAMN04488094_104148 | Not Available | Positive | 2018193 - 2019257 | 37556.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
