Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04488094_104129 | Not Available | Positive | 2000569 - 2001564 | 36888.7 |
| abc-2 type transport system permease protein | SAMN04488094_104130 | Not Available | Positive | 2001561 - 2002322 | 27834.9 |
| gcra cell cycle regulator | SAMN04488094_104131 | Not Available | Negative | 2002422 - 2003042 | 22296.4 |
| abc-2 type transport system permease protein | SAMN04488094_104132 | Not Available | Positive | 2003189 - 2003992 | 28743.9 |
| acetylornithine/n-succinyldiaminopimelate aminotransferase | SAMN04488094_104133 | Not Available | Positive | 2004229 - 2005413 | 41390.9 |
| ornithine carbamoyltransferase | SAMN04488094_104134 | Not Available | Positive | 2005463 - 2006452 | 36282.3 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488094_104135 | Not Available | Negative | 2006456 - 2006800 | 12396.9 |
| cysteinyl-trna synthetase | SAMN04488094_104136 | Not Available | Positive | 2007018 - 2008541 | 57539.1 |
| hypothetical protein | SAMN04488094_104137 | Not Available | Positive | 2008538 - 2008672 | 5061.97 |
| 2-isopropylmalate synthase | SAMN04488094_104138 | Not Available | Positive | 2008669 - 2010294 | 58175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
