Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04488094_104119 | Not Available | Negative | 1986923 - 1987870 | 34452.4 |
| uncharacterized conserved protein, contains zn-finger domain | SAMN04488094_104120 | Not Available | Positive | 1987986 - 1988183 | 6888.97 |
| hypothetical protein | SAMN04488094_104121 | Not Available | Positive | 1988313 - 1988780 | 16060.7 |
| dna polymerase i | SAMN04488094_104122 | Not Available | Positive | 1989101 - 1991896 | 101527.0 |
| cobalt-zinc-cadmium efflux system protein | SAMN04488094_104123 | Not Available | Positive | 1992097 - 1993023 | 33055.4 |
| hypothetical protein | SAMN04488094_104124 | Not Available | Negative | 1993076 - 1993681 | 22047.1 |
| moxr-like atpase | SAMN04488094_104125 | Not Available | Positive | 1993742 - 1994749 | 36222.0 |
| protein of unknown function duf58 | SAMN04488094_104126 | Not Available | Positive | 1994746 - 1995639 | 32763.8 |
| n-terminal double-transmembrane domain-containing protein | SAMN04488094_104127 | Not Available | Positive | 1995639 - 1998425 | 99810.0 |
| hypothetical protein | SAMN04488094_104128 | Not Available | Positive | 1998422 - 2000506 | 74843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
