Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | SAMN04488094_104108 | Not Available | Positive | 1977573 - 1979111 | 54523.7 |
| methionine adenosyltransferase | SAMN04488094_104110 | Not Available | Positive | 1979198 - 1980367 | 42298.7 |
| trna (guanine-n(7)-)-methyltransferase | SAMN04488094_104111 | Not Available | Positive | 1980626 - 1981354 | 27759.9 |
| outer membrane protein ompa | SAMN04488094_104112 | Not Available | Negative | 1981413 - 1982072 | 22462.4 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN04488094_104113 | Not Available | Negative | 1982178 - 1983038 | 30826.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04488094_104114 | Not Available | Positive | 1983170 - 1983811 | 23901.2 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488094_104115 | Not Available | Positive | 1983808 - 1984800 | 35291.0 |
| helix-turn-helix domain-containing protein | SAMN04488094_104116 | Not Available | Positive | 1984883 - 1985116 | 8123.9 |
| histidine triad (hit) family protein | SAMN04488094_104117 | Not Available | Positive | 1985378 - 1985761 | 13831.6 |
| d-alanine-d-alanine ligase | SAMN04488094_104118 | Not Available | Negative | 1985879 - 1986922 | 36195.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
