Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | SAMN04488094_10458 | Not Available | Negative | 1932001 - 1934436 | 87124.6 |
| protein of unknown function | SAMN04488094_10459 | Not Available | Negative | 1934445 - 1935155 | 25641.4 |
| lao/ao transport system kinase | SAMN04488094_10460 | Not Available | Positive | 1935524 - 1936510 | 34973.0 |
| d-xylulose reductase | SAMN04488094_10461 | Not Available | Positive | 1936804 - 1937847 | 36569.6 |
| hypothetical protein | SAMN04488094_10462 | Not Available | Negative | 1937688 - 1938389 | 25588.2 |
| arac-type dna-binding protein | SAMN04488094_10463 | Not Available | Positive | 1938645 - 1939529 | 33603.6 |
| monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04488094_10464 | Not Available | Positive | 1939626 - 1940543 | 31984.0 |
| monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04488094_10465 | Not Available | Positive | 1940618 - 1942120 | 54659.3 |
| ribose transport system permease protein | SAMN04488094_10466 | Not Available | Positive | 1942110 - 1943096 | 33844.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_10467 | Not Available | Positive | 1943424 - 1944149 | 24807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
