Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04488094_10448 | Not Available | Negative | 1923954 - 1925045 | 38306.2 |
| large subunit ribosomal protein l32 | SAMN04488094_10449 | Not Available | Negative | 1925081 - 1925287 | 7523.77 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN04488094_10450 | Not Available | Negative | 1925500 - 1926039 | 19628.4 |
| beta-barrel assembly machine subunit bame | SAMN04488094_10451 | Not Available | Positive | 1926124 - 1926591 | 17026.2 |
| peptide-methionine (r)-s-oxide reductase | SAMN04488094_10452 | Not Available | Negative | 1926621 - 1927031 | 15130.4 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN04488094_10453 | Not Available | Positive | 1927196 - 1927948 | 27260.1 |
| atp-binding cassette, subfamily f, uup | SAMN04488094_10454 | Not Available | Positive | 1927980 - 1929812 | 66041.9 |
| hypothetical protein | SAMN04488094_10455 | Not Available | Positive | 1929926 - 1930276 | 12763.2 |
| hypothetical protein | SAMN04488094_10456 | Not Available | Positive | 1930368 - 1930778 | 14319.0 |
| hypothetical protein | SAMN04488094_10457 | Not Available | Positive | 1930980 - 1931963 | 36440.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
